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Microsatellites and SNPs linkage analysis in a Sardinian genetic isolate confirms several essential hypertension loci previously identified in different populations

Mocci, Evelina and Concas, Maria P. and Fanciulli, Manuela and Pirastu, Nicola and Adamo, Mauro and Cabras, Valentina and Fraumene, Cristina and Persico, Ivana and Sassu, Alessandro and Picciau, Andrea and Prodi, Dionigio A. and Serra, Donatella and Biino, Ginevra and Pirastu, Mario and Angius, Andrea (2009) Microsatellites and SNPs linkage analysis in a Sardinian genetic isolate confirms several essential hypertension loci previously identified in different populations. BMC Medical Genetics, Vol. 10 (81), p. 1-13. ISSN 1471-2350. Article.

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DOI: 10.1186/1471-2350-10-81

Abstract

Background. A multiplicity of study designs such as gene candidate analysis, genome wide search (GWS) and, recently, whole genome association studies have been employed for the identification of the genetic components of essential hypertension (EH). Several genome-wide linkage studies of EH and blood pressure-related phenotypes demonstrate that there is no single locus with a major effect while several genomic regions likely to contain EH-susceptibility loci were validated by multiple studies.
Methods. We carried out the clinical assessment of the entire adult population in a Sardinian village (Talana) and we analyzed 16 selected families with 62 hypertensive subjects out of 267 individuals. We carried out a double GWS using a set of 902 uniformly spaced microsatellites and a high-density SNPs map on the same group of families.
Results. Three loci were identified by both microsatellites and SNP scans and the obtained linkage results showed a remarkable degree of similarity. These loci were identified on chromosome 2q24, 11q23.1–25 and 13q14.11–21.33. Further support to these findings is their broad description present in literature associated to EH or related phenotypes. Bioinformatic investigation of these loci shows several potential EH candidate genes, several of whom already associated to blood pressure regulation pathways.
Conclusion. Our search for major susceptibility EH genetic factors evidences that EH in the genetic isolate of Talana is due to the contribution of several genes contained in loci identified and replicated by earlier findings in different human populations.

Item Type:Article
ID Code:3541
Status:Published
Refereed:Yes
Uncontrolled Keywords:Genomes, essential hypertension, genetic factors, Sardinia
Subjects:Area 05 - Scienze biologiche > BIO/18 Genetica
Divisions:002 Altri enti e centri di ricerca del Nord Sardegna > CNR-Consiglio Nazionale delle Ricerche > Istituto di genetica delle popolazioni, Alghero
Publisher:BioMed Central
ISSN:1471-2350
Deposited On:27 Jan 2010 10:31

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