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A Common variant in RAB27A gene is associated with fractional exhaled nitric oxide levels in adults

Bouzigon, Emmanuelle and Nadif, Rachel and Thompson, Emma E. and Concas, Maria Pina and Kuldanek, Susan and Du, Gaixin and Brossard, Myriam and Lavielle, Nolwenn and Sarnowski, Chloé and Vaysse, Amaury and Dessen, Philippe H. and Van Der Valk, Ralf Johannes Philippus and Duijts , Liesbeth and Henderson, A. John and Jaddoe, Vincent W. V. W. and De Jongste, Johan C. and Casula, Stefania and Biino, Ginevra and Dizier, Marie Hélène and Pin, Isabelle and Matran, Régis and Lathrop, Mark G. and Pirastu, Mario and Demenais, Florence M. and Ober, Carole C. (2015) A Common variant in RAB27A gene is associated with fractional exhaled nitric oxide levels in adults. Clinical & Experimental Allergy, Vol. 45 (4), p. 797-806. eISSN 1365-2222. Article.

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DOI: 10.1111/cea.12461

Abstract

Background: Exhaled nitric oxide (FeNO) is a biomarker for eosinophilic inflammation in the airways and for responsiveness to corticosteroids in asthmatics.
Objective: We sought to identify in adults the genetic determinants of fractional exhaled nitric oxide (FeNO) levels and to assess whether environmental and disease-related factors influence these associations.
Methods: We performed a genome-wide association study of FeNO through meta-analysis of two independent discovery samples of European ancestry: the outbred EGEA study (French Epidemiological study on the Genetics and Environment of Asthma, N = 610 adults) and the Hutterites (N = 601 adults), a founder population living on communal farms. Replication of main findings was assessed in adults from an isolated village in Sardinia (Talana study, N = 450). We then investigated the influence of asthma, atopy and tobacco smoke exposure on these genetic associations, and whether they were also associated with FeNO values in children of the EAGLE (EArly Genetics & Lifecourse Epidemiology, N = 8858) consortium.
Results: We detected a common variant in RAB27A (rs2444043) associated with FeNO that reached the genome-wide significant level (P = 1.6 × 10−7) in the combined discovery and replication adult data sets. This SNP belongs to member of RAS oncogene family (RAB27A) and was associated with an expression quantitative trait locus for RAB27A in lymphoblastoid cell lines from asthmatics. A second suggestive locus (rs2194437, P = 8.9 × 10−7) located nearby the sodium/calcium exchanger 1 (SLC8A1) was mainly detected in atopic subjects and influenced by inhaled corticosteroid use. These two loci were not associated with childhood FeNO values.
Conclusions and Clinical Relevance: This study identified a common variant located in RAB27A gene influencing FeNO levels specifically in adults and with a biological relevance to the regulation of FeNO levels. This study provides new insight into the biological mechanisms underlying FeNO levels in adults.

Item Type:Article
ID Code:10995
Status:Published
Refereed:Yes
Uncontrolled Keywords:Airway inflammation, asthma, atopy, exhaled nitric oxide, genetics, genome-wide association study
Subjects:Area 05 - Scienze biologiche > BIO/18 Genetica
Divisions:002 Altri enti e centri di ricerca del Nord Sardegna > CNR-Consiglio Nazionale delle Ricerche > Istituto di genetica delle popolazioni, Alghero
Publisher:Blackwell Science
eISSN:1365-2222
Copyright Holders:© 2014 John Wiley & Sons
Deposited On:16 Jun 2015 09:30

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