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Genome sequence of Ensifer medicae Di28: an effective N2-fixing microsymbiont of Medicago murex and M. polymorpha

Garau, Giovanni and Terpolilli, Jason and Hill, Yvette and Tian, Rui and Howieson, John and Bräu, Lambert and Goodwin, Lynne and Han, James and Reddy, TBK and Huntemann, Marcel and Pati, Amrita and Woyke, Tanja and Mavromatis, Konstantinos and Markowitz, Victor and Ivanova, Natalia and Kyrpides, Nikos and Reeve, Wayne G. (2014) Genome sequence of Ensifer medicae Di28: an effective N2-fixing microsymbiont of Medicago murex and M. polymorpha. Standards in Genomic Sciences, Vol. 9 (1), p. 4. eISSN 1944-3277. Article.

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DOI: 10.1186/1944-3277-9-4

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Abstract

Ensifer medicae Di28 is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Medicago spp. Di28 was isolated in 1998 from a nodule recovered from the roots of M. polymorpha growing in the south east of Sardinia (Italy). Di28 is an effective microsymbiont of the annual forage legumes M. polymorpha and M. murex and is capable of establishing a partially effective symbiotic association with the perennial M. sativa. Here we describe the features of E. medicae Di28, together with genome sequence information and its annotation. The 6,553,624 bp standard draft genome is arranged into 104 scaffolds of 104 contigs containing 6,394 protein-coding genes and 75 RNA-only encoding genes. This rhizobial genome is one of 100 sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project.

Item Type:Article
ID Code:10539
Status:Published
Refereed:Yes
Uncontrolled Keywords:Root-nodule bacteria, Nitrogen fixation, Rhizobia, Alphaproteobacteria
Subjects:Area 07 - Scienze agrarie e veterinarie > AGR/13 Chimica agraria
Divisions:001 Università di Sassari > 01-a Nuovi Dipartimenti dal 2012 > Agraria
Publisher:Michigan State University / Genomic Standards Consortium
eISSN:1944-3277
Copyright Holders:© 2014 Garau et al.; licensee BioMed Central Ltd.
Deposited On:18 Dec 2014 10:47

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